Insertion junction: CLIP2.064013_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064013
Chromosome:chromosome 16
Location:6072707
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677700 NUP62 Nucleoporin 62; (1 of 1) K14306 - nuclear pore complex protein Nup62 (NUP62, NSP1) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCAGGGGATGGGGTCTGGCACTTTCATTTCCCTCCCGCCCCCCCCCC
Internal bar code:CGGATTTCTTGTCACTACGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1084
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAAATGCGGGCTGGTTTG
Suggested primer 2:AATTGACCCTACCCGCTTGG