Insertion junction: CLIP2.064027_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064027
Chromosome:chromosome 10
Location:4162644
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g448977 intron
lncRNA_TCONS_00033069 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCAATGCGTCGTCCAGGGATGCGACCTTTAGTACCGGTACTTGACGT
Internal bar code:AAGGACTGAAATGATCGGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:887
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATGAAGCCGGATAGTCA
Suggested primer 2:GCTACACCGGGCTAAAGGTT