Insertion junction: CLIP2.064038_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064038
Chromosome:chromosome 12
Location:165915
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g484400 FKM7 DNA methylase in the FkbM family; (1 of 13) PF05050 - Methyltransferase FkbM domain (Methyltransf_21) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCAAAGGAAGGATTGCCGTGGCTGCGTACAGAGGTGAACCCTAACGG
Internal bar code:GTCTGATATGGTTATACATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2730
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGGGACATTGGCTGGAT
Suggested primer 2:GCTCTGCGTTGCGTGATTAG