Insertion junction: CLIP2.064052_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064052
Chromosome:chromosome 9
Location:5967248
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412250 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATAGGTAGGGGTCCGTGGCACTCCATCCGCAAAGACCGAAATGCATGTC
Internal bar code:CGGGCGGTCTGTCCATGATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1364
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCTTCTGGACGTACTTCC
Suggested primer 2:TTTGTGGCACCAGGGGATAC