Insertion junction: CLIP2.064060_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064060
Chromosome:chromosome 3
Location:6847844
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197550 TMEM48,NDC1 (1 of 1) K14315 - nucleoporin NDC1 (NDC1, TMEM48); Nuclear pore protein NDC1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCACACAATGAAGCAACAAATAGCACGTGCTACGCCTAGGAAAGGCG
Internal bar code:GTGACATAGGCTGGCTCGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2638
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGCCTAGGGAGTGCCAC
Suggested primer 2:GCACAGCAGGCAACAAATCA