Insertion junction: CLIP2.064061_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064061
Chromosome:chromosome 3
Location:8978030
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800413 (1 of 1) PTHR10445 - GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGATGATATTGTAATAGGAGGCAAACGGCTTCAGTGCAGACCAGCACA
Internal bar code:TGTGTTGTGGATTTATAAGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1389
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCTTGTCATCACCGCAG
Suggested primer 2:GAATCCACTTCCAATGCCGC