Insertion junction: CLIP2.064066_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.064066
Chromosome:chromosome 6
Location:4918290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280900 VTI2,GOS1 (1 of 1) K08495 - golgi SNAP receptor complex member 1 (GOSR1, GOS1); Intra-Golgi Qb-SNARE, Gos1/Gos28-family (Qb.II) outside_mRNA
Cre06.g280950 PYK2 Pyruvate kinase 2; (1 of 6) 2.7.1.40 - Pyruvate kinase / Phosphoenolpyruvate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATCCTATTGTTTTCGGATACCTAAATTCGACATTCGGGCTTCATGCAG
Internal bar code:CTCGTCTCCCTTAGAGGCAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2543
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCACTGGATTCGTGGACT
Suggested primer 2:TTTGGGGGAGACGCTACAAC