Insertion junction: CLIP2.064078_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064078
Chromosome:chromosome 10
Location:5215439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455950 FAP407 Flagellar Associated Protein 407; (1 of 4) K03809 - NAD(P)H dehydrogenase (quinone) (wrbA) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGTAATTCGCTCGGGGAGCTTTCTCGCTTACTTTATTATGTGTGGCAT
Internal bar code:TCGATATGCATATTGGTCTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3425
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAGATGGGGCCAGGTAGT
Suggested primer 2:CGTTGAGCTTTTTCGTGCCA