Insertion junction: CLIP2.064092_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064092
Chromosome:chromosome 3
Location:1286748
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150101 NRT2D Nitrate/nitrite transporter; (1 of 5) PTHR23515//PTHR23515:SF2 - FAMILY NOT NAMED // HIGH AFFINITY NITRATE TRANSPORTER 2.3-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACATCAGGAGGCGCCTTGTCTGCCGCCACAGGCACCAGTGACGAGGC
Internal bar code:CCTGAGATAGATTAATGGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1381
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GATGATCTCTCCTGTGGCCG
Suggested primer 2:GCCATCCTCCGCTGAGATAC