Insertion junction: CLIP2.064092_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064092
Chromosome:chromosome 3
Location:1286750
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150101 NRT2D Nitrate/nitrite transporter; (1 of 5) PTHR23515//PTHR23515:SF2 - FAMILY NOT NAMED // HIGH AFFINITY NITRATE TRANSPORTER 2.3-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCGGACCAGCAGCCGCGGTGCCGGCTGCAAAGCCCTCTGCTGCCGCA
Internal bar code:TTTGCATATTATCCTGTAAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3106
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATCCTCCGCTGAGATAC
Suggested primer 2:GATGATCTCTCCTGTGGCCG