Insertion junction: CLIP2.064093_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064093
Chromosome:chromosome 14
Location:3037529
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g627850 (1 of 2) 1.17.1.8 - 4-hydroxy-tetrahydrodipicolinate reductase / Dihydrodipicolinate reductase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGATAGATCCAGCTGCCGGCCCCATCCCGGGCTGCGGCACTTCCACGGC
Internal bar code:AAAGGCGAGCTGATCTATTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1449
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGAAGTAGGAGGCTGGA
Suggested primer 2:AAGAGCTCCACGTATCGCTG