Insertion junction: CLIP2.064101_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064101
Chromosome:chromosome 6
Location:1858298
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g263850 PPT2,TPT2,TPT20 Triose phosphate/phosphate translocator; (1 of 2) PTHR11132:SF70 - PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 1, CHLOROPLASTIC gene_edge/outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCCGTCGCACCCAATCCCTGACACGGGCACCATAACTCCGTAAACGCC
Internal bar code:ATGGGGGGGTTACCAGGGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2066
LEAP-Seq percent confirming:92.9412
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCGGATGGGTGCAATTGT
Suggested primer 2:CCCTTCCAGTAGGCAGTGTG