Insertion junction: CLIP2.064110_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064110
Chromosome:chromosome 2
Location:4803703
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g109000 (1 of 2) PF03254 - Xyloglucan fucosyltransferase (XG_FTase) 3'UTR
Cre02.g109050 OPR5 OctotricoPeptide Repeat protein 5 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGATTAGAAGCACACGTAGATAACAGCTCAACTTTGGAAAGACCAGGGC
Internal bar code:ATGTAGGACTGGGGAGCTTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1894
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGACAAAGAAAAGCGAGGGC
Suggested primer 2:ATGCTGTTGATGGGGAGTGG