Insertion junction: CLIP2.064120_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064120
Chromosome:chromosome 14
Location:1674352
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g618820 CSB57 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon); {"Probable transposon-derived protein of Chlamydomonas-Specific family B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAATTGCTGGTGGGTGGGTTGAGTGGGATTGCAAGGTGGGTGGGTTGAG
Internal bar code:AGATCCAGCGTAGTTATACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1298
LEAP-Seq percent confirming:40.9091
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTATCAACCCAGCCACCT
Suggested primer 2:GCAGCTGGATGAGGAGTTGT