Insertion junction: CLIP2.064136_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.064136
Chromosome:chromosome 2
Location:3533416
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099150 SNAPA1,FAP375 Alpha-SNAP, SNARE complex protein; (1 of 1) K15296 - alpha-soluble NSF attachment protein (NAPA, SNAPA, SEC17) 3'UTR
Cre02.g099200 (1 of 1) K06100 - symplekin (SYMPK) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGCTTGACACATGGGAGGTTGGGTGACTTGACCGTTTGTGGTTGGGC
Internal bar code:TGCAGGGAATTCAACGTTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1168
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGCATGCATGTGTACGG
Suggested primer 2:CTATAACCCTGACACGCCCC