Insertion junction: CLIP2.064149_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064149
Chromosome:chromosome 13
Location:239095
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g563600 UBQ7 Ubiquitin-fusion protein; (1 of 5) IPR000626//IPR019956//IPR029071 - Ubiquitin domain // Ubiquitin // Ubiquitin-related domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGCTTTGAGGCATGTGGCGCCTGCCACCCGGCTGCGCCCTCTAGGCC
Internal bar code:TTTTTTTTTCGTAATGCCTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1467
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCTAGTTTGCACGGTGGTCT
Suggested primer 2:CATTGTGCTATGGACGCGTG