Insertion junction: CLIP2.064153_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064153
Chromosome:chromosome 7
Location:87203
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g312650 3'UTR
Cre07.g800764 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGACTGAATTTGAGTCCATTTGCTGAGCAGGGATTTTGAGTACAGGGTT
Internal bar code:GGTGCTAATCGCATTAACAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1709
LEAP-Seq percent confirming:89.8305
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TACGTCCAGCCCATAATCGC
Suggested primer 2:TTCAAGTCGGCACTCCAGAC