Insertion junction: CLIP2.064156_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.064156
Chromosome:chromosome 16
Location:3972350
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g689700 HPR5 (1 of 1) 1.1.1.272 - D-2-hydroxyacid dehydrogenase (NADP(+)); Hydroxypyruvate reductase 5 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTTTGCTTTGCTTTCACCTCGTTGCCCATAGAACTGCCTTCATAATTG
Internal bar code:TGGTCGCAATGATATATAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1807
LEAP-Seq percent confirming:6.25
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCAGCTTTATCCGCTTGC
Suggested primer 2:AGCAAGTTCACTGAGGACCG