Insertion junction: CLIP2.064157_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064157
Chromosome:chromosome 16
Location:1505099
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653000 (1 of 1) K18404 - tudor domain-containing protein 3 (TDRD3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGAAACTAGCGCCTTAGACCGCTCGGCCACCTCGCCGCAGGTGATGC
Internal bar code:AGTGTGCAAACGCCTACAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:468
LEAP-Seq percent confirming:4.16667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGACTACGATGATGGCG
Suggested primer 2:CGATATGTGCCGTACGGTGA