Insertion junction: CLIP2.064157_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064157
Chromosome:chromosome 16
Location:1505099
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653000 (1 of 1) K18404 - tudor domain-containing protein 3 (TDRD3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTAGTCGGTTCATCCGACGGAAGCTACTAGTCCGAAAGGGCGTGAGTTC
Internal bar code:AGTGTGCAAACGCCTACAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1358
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGATATGTGCCGTACGGTGA
Suggested primer 2:TGACGACTACGATGATGGCG