Insertion junction: CLIP2.064162_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064162
Chromosome:chromosome 2
Location:1827192
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g087000 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type 3'UTR
Cre02.g087050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGCATCTCATGAGGTGATGCTATATGAATGTGGCAGCAGAATGCCCT
Internal bar code:AAAACCGACCATAAGTCATAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2392
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGTCAGGTGTGGGCAACA
Suggested primer 2:CTGTACTCGGGTTTGGCTGT