Insertion junction: CLIP2.064164_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.064164
Chromosome:chromosome 16
Location:2431627
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659950 PRPS5 Chloroplast Ribosomal Protein S5; (1 of 2) K02988 - small subunit ribosomal protein S5 (RP-S5, MRPS5, rpsE) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGATCTACAACACCGCCTCTACTCCATGCGCGCATGGCGCGCCAACG
Internal bar code:GTCACCCCGGGAGATGCTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5346
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:101
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:101

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACGGAATGCGTTGGGTA
Suggested primer 2:GCACGGTATTTGCTGTGGTG