Insertion junction: CLIP2.064171_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064171
Chromosome:chromosome 6
Location:1669399
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g262250 AP1M1 (1 of 1) K12393 - AP-1 complex subunit mu (AP1M); Mu1-Adaptin 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATTCAATTTTCCAGCGCAATGAGCCTGGACCGAAGTCAACCCTGTCTT
Internal bar code:CTATCTTTTGTAAACATTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1734
LEAP-Seq percent confirming:56.25
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGAATCAGCGCTGTCGAAAG
Suggested primer 2:GCTCCACACAACTGCCTAGT