Insertion junction: CLIP2.064173_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064173
Chromosome:chromosome 10
Location:3053164
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441000 (1 of 1) K17498 - transcription factor SPN1 (SPN1, IWS1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCCGTCTTGTGGGTTGTGTGTGCGCGTGTGAGTGCCTGTTTGCGGCG
Internal bar code:TTACTATAGTAGCGCTATCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2902
LEAP-Seq percent confirming:47.3684
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGAGGTGTTGTTTCCGAG
Suggested primer 2:CTCGTGCTCGACTATCCACC