Insertion junction: CLIP2.064175_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064175
Chromosome:chromosome 14
Location:1954893
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g620702 PHC24 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 24 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGATTGCGTGAAGCACCGCCGCGAGGGCTGGCGCGGTGAATCGTGCA
Internal bar code:TCACGCATTAAACAAGGTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1908
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CACGATGTGCACAAACCGTT
Suggested primer 2:CGCAACAACGTACTTGCCAA