Insertion junction: CLIP2.064179_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064179
Chromosome:chromosome 9
Location:5256461
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407120 (1 of 781) IPR000104 - Antifreeze protein, type I outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGTAACCACGTCGCCCCTTGGACAACCTGCACGAGCGCACGTTTGGA
Internal bar code:GAGCTATGAAAGATGAGTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2494
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGAATCTCGCTGAGTACC
Suggested primer 2:GACGGCGGCATTGTTATGAC