Insertion junction: CLIP2.064182_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.064182
Chromosome:chromosome 16
Location:628975
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691950 (1 of 6) IPR006502//IPR011333 - Protein of unknown function PDDEXK-like // POZ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTGTCGACAGTGTGGTTCTGCCGTGCATAGTAAGGACGTGCATTTTGA
Internal bar code:ACCGGAACACAAGGGAGACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1775
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCTTTGTTCGACCGCAA
Suggested primer 2:GGCCCAGTGGTCCAAATACA