Insertion junction: CLIP2.064203_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.064203
Chromosome:chromosome 2
Location:6180332
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800251 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTCCCCCCAGATACCGTAACCTCAGATTCGTGCCCTTTCCCTGCACC
Internal bar code:TATTTTTTCGCACATAGCGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2146
LEAP-Seq percent confirming:65.1163
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGAACGTTTCGTGCAAGC
Suggested primer 2:GTTGTGAACACCTTGCGACC