Insertion junction: CLIP2.064219_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064219
Chromosome:chromosome 1
Location:247124
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001550 CIF3,TIF3A,TIF3 (1 of 1) K02520 - translation initiation factor IF-3 (infC, MTIF3); Chloroplast translation initiation factor 3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTCAGTTCGTGGTGGAGGGCCAGGGCGGGGTGGGGCGTTGGCGTGCC
Internal bar code:TTGCATGACTCATTAGTGTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:5111
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TATATGTGTGTCCCGCGAGC
Suggested primer 2:TTCAAGACCGGCACCTACAC