Insertion junction: CLIP2.064225_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.064225
Chromosome:chromosome 12
Location:6527560
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g537900 (1 of 1) PF11927 - Protein of unknown function (DUF3445) (DUF3445) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGTGATCAACTGACCATCATGCGGTCATGCCCCGCCGCCGCTTACAC
Internal bar code:CGGTAGCGAGGTTATTTGTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1968
LEAP-Seq percent confirming:89.2857
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGACTACGGTTTCCACGG
Suggested primer 2:AGCAGGCCAGTCTATCAGGA