Insertion junction: CLIP2.064226_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064226
Chromosome:chromosome 7
Location:2509321
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800791 (1 of 25) IPR001965//IPR011011//IPR013083//IPR019787 - Zinc finger, PHD-type // Zinc finger, FYVE/PHD-type // Zinc finger, RING/FYVE/PHD-type // Zinc finger, PHD-finger 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCAGCGACGTCTCGAGGCCAAGTGCGTGGGAGAGAGCCACCAGCCCG
Internal bar code:TACACTGTTACCTTGATGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3495
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CATATTGCCAGTCTGCGTGC
Suggested primer 2:CGGTTGTCGGGTGAGGTTTA