Insertion junction: CLIP2.064227_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064227
Chromosome:chromosome 12
Location:2658723
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505500 HTR17 Histone H3; (1 of 35) K11253 - histone H3 (H3) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGCAGAAATGTTTGGCTGTCTATAACCTGGGTGCCGTTTGGCTATAA
Internal bar code:CGATCTTTGTGTTGATATGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1527
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGGATAGCGGGCTTGGTAAT
Suggested primer 2:GCACTCTAGCCAGCTCTAGC