Insertion junction: CLIP2.064227_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064227
Chromosome:chromosome 12
Location:2658724
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505500 HTR17 Histone H3; (1 of 35) K11253 - histone H3 (H3) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCTTCTTTTTCTAGTCTCCCAATCAACTATCCAAGATGGCCCGCACCA
Internal bar code:CGCGAGAACCTGTTTCCGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3735
LEAP-Seq percent confirming:86.5672
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTCTAGCCAGCTCTAGC
Suggested primer 2:CGGATAGCGGGCTTGGTAAT