Insertion junction: CLIP2.064230_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064230
Chromosome:chromosome 11
Location:3969469
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g480300 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCAGAGTTGCATCCTGCAGTCGGCTTGTGGTAAAATGCGATGTCCAGT
Internal bar code:TTTGACTGGTATGATAGTCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2544
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCAGCAGGCCATTATTG
Suggested primer 2:AAGCTCGCGATACTACCAGC