Insertion junction: CLIP2.064234_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.064234
Chromosome:chromosome 6
Location:5184530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g283600 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCGCGAGAGCAAGTAGAAGTGCAGGATCGACAAGTCCATCATGCACAT
Internal bar code:CCCAATGTGTTAGTAACGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3855
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCTCCGTATTCGCAACG
Suggested primer 2:CCAGGCCTCAGTTCGTTTCT