Insertion junction: CLIP2.064239_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.064239
Chromosome:chromosome 14
Location:1715989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g618950 3'UTR
Cre14.g618979 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACATGTCTTCCAACCGGTGCCCATGCCGCTCCCTACCCATGGCGACGC
Internal bar code:GGTAATTCAATAACGGTTAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1147
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATACACCGTACCGTCAT
Suggested primer 2:TCTGGTCGGCTGCAAGAATT