Insertion junction: CLIP2.064242_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064242
Chromosome:chromosome 16
Location:4451849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g668000 (1 of 6) IPR007527 - Zinc finger, SWIM-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATTAAATAATTATTAATGGCCCTGGCTTCCCGAAAATAAGTATCAACA
Internal bar code:CGGCTGTACGATTTTTTACCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2309
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTGACTCGTGAAACCGT
Suggested primer 2:TCAAAGAACCGCCTTCCTCC