Insertion junction: CLIP2.064244_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.064244
Chromosome:chromosome 6
Location:5307540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g284700 AAT2 Alanine aminotransferase; (1 of 1) K00814 - alanine transaminase (GPT, ALT) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTGCCTCACTGCTGGCAATCGCCCGCGCATACGCGCGCCAATCTTGC
Internal bar code:GTCATGATACATCGCGAGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1000
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTTCACGGCTACCCCCAG
Suggested primer 2:AACAGACGACCACTCAGCTG