Insertion junction: CLIP2.064252_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064252
Chromosome:chromosome 8
Location:3826391
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381483 SDR15 (1 of 239) IPR016024 - Armadillo-type fold; Short-chain dehydrogenase/reductase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATAAGTAGATGATGCTTTACGTCTACTTAAGCTTACCTCATTCTATTTT
Internal bar code:TACCGGTTACGGCCCAGAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:720
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGGATTTACGCGACTCGAGG
Suggested primer 2:CGAGCTATCTCCTGGCACTG