Insertion junction: CLIP2.064261_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064261
Chromosome:chromosome 3
Location:6478270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193600 (1 of 4) 2.7.11.13 - Protein kinase C / PKC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGCACATGTTGTGAACCCACAAGCAGCCGCCATACGGTACACAAACA
Internal bar code:TCTCGCGGTCCCGGGTAGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1515
LEAP-Seq percent confirming:89.1892
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAATGCGTATACGGACGT
Suggested primer 2:TGTCGAATGCACCATGACGA