Insertion junction: CLIP2.064283_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064283
Chromosome:chromosome 6
Location:3388720
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278092 (1 of 41) PF13920 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGGTTTCCCGGCGGTACGCCACTGGCCCATTGGCTGTGGGCATTGAT
Internal bar code:AGGCTACACAGGTGTCTGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:392
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGAAGGCCAAAAATGCG
Suggested primer 2:CCAACACCACCACTTCCAGT