Insertion junction: CLIP2.064283_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064283
Chromosome:chromosome 6
Location:3388730
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278092 (1 of 41) PF13920 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGACTGCTGATCCTTCAAGCATTCACAATGGGTGATCAAGACACGTCA
Internal bar code:AGGCTACACAGGTGTCTGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3007
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACACCACCACTTCCAGT
Suggested primer 2:AGCAGAAGGCCAAAAATGCG