Insertion junction: CLIP2.064288_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.064288
Chromosome:chromosome 3
Location:4191404
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173400 (1 of 5) PTHR10751 - GUANYLATE BINDING PROTEIN 3'UTR
Cre03.g173450 PAO4 Pheophorbide a oxygenase-related protein; (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAACCCGAATGTGCAACGCGAATTGATGAATTCCTGCTGGGGGCCTCCC
Internal bar code:TGAGCTTGGGGCTATTCAAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2231
LEAP-Seq percent confirming:98.5916
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CAGACGGCAAACAATGTGCA
Suggested primer 2:GTGGTGGCAATCAAGGCTTG