Insertion junction: CLIP2.064291_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.064291
Chromosome:chromosome 4
Location:1240933
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g215100 SSS1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTTAGTGCAGCATGTAAAAAATGTTTATGTGCACCTTCTGGGCCTGGG
Internal bar code:GCGTTTAAGTAGACTAGTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2620
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATCTTACGCCGCGATAA
Suggested primer 2:ACAGCTACAATGGGGAGCAC