Insertion junction: CLIP2.064292_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.064292
Chromosome:chromosome 9
Location:882076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403450 (1 of 6) PF12796//PF13920 - Ankyrin repeats (3 copies) (Ank_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCACGAACAGCTCTCACTAGATCTCCTCTCGGTGTCAGTCAGCCAAA
Internal bar code:ACTATTGCTTCGAGTGTTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4604
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCGGGAGTGCAGAATTGA
Suggested primer 2:GCCGTCAAGGGACATTCTCA