Insertion junction: CLIP2.064300_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064300
Chromosome:chromosome 3
Location:6855329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197600 (1 of 1) PTHR12972//PTHR12972:SF0 - DOWNSTREAM NEIGHBOR OF SON // PROTEIN DOWNSTREAM NEIGHBOR OF SON 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGGGGCCGAGGCTTCTGAGAACTGGGCCGGGCCAGAAGGGCTCGGCTT
Internal bar code:ACTTTCGGAACTGGTTTATCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3923
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:100
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAACTGCTCCCACGTAT
Suggested primer 2:CTGTTTATGGCGTGCGGATG