Insertion junction: CLIP2.064309_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064309
Chromosome:chromosome 14
Location:430984
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g610663 (1 of 1) PTHR12801//PTHR12801:SF51 - EXONUCLEASE // PROTEIN Y56A3A.33 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATTTAGAAGTCCCTTTGTGCAAACTCGATCCAAGGCCCAATCAGCTT
Internal bar code:TTGGCGCACCGCCCTTGTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1308
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGTGATGATGGTGCTGG
Suggested primer 2:TTACGGTCTATGGGCTTGCC