Insertion junction: CLIP2.064310_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.064310
Chromosome:chromosome 15
Location:1193968
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g639050 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGTACACAAGGTATTCGTGATTAACTCCGGCGCCGTCTGGGTTGGGGT
Internal bar code:GATTTAACTAAAACACGCTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:968
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAGTGCTGGTTGCTCCTC
Suggested primer 2:CTACGGGACTACGCCAATCC