Insertion junction: CLIP2.064322_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.064322
Chromosome:chromosome 16
Location:4390503
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g668451 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATACTGTATGATTGATAAGACCAATGTCCAGCAGCGTTCCGCCGCATG
Internal bar code:CCCTCAGGTCCGGTATTAGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1561
LEAP-Seq percent confirming:83.9286
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCCGGATGTAAGACGATG
Suggested primer 2:CGTCACTTGTCGAACTGGGA