Insertion junction: CLIP2.064324_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064324
Chromosome:chromosome 13
Location:2578113
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580550 HLM20 (1 of 2) K11426 - SET and MYND domain-containing protein (SMYD); putative N-methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGACATAACATGCAGTGTCAGCGGGCCCTTGGGCGGGCCTGCGCCGGCC
Internal bar code:AACGAAACTTTGAGCTATCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:690
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTGTCTACAGCCCCCTCC
Suggested primer 2:TGCAGAGTCAATGCCGATGT